Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter antarcticus |
| Strain | strain ATCC 51969 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1362221 bp
Thymine Count
1361672 bp
Guanine Count
914548 bp
Cytosine Count
930759 bp
Genome Length
4570120 bp
Protein-coding Genes
4074 genes
Non-Coding Genes
88 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN03003324_01609 | Not Available | Positive | 1745650 - 1746378 | 28885.3 |
| signal transduction histidine kinase | SAMN03003324_01610 | Not Available | Positive | 1746324 - 1747130 | 29945.9 |
| two component transcriptional regulator, luxr family | SAMN03003324_01611 | Not Available | Positive | 1747142 - 1747798 | 24813.2 |
| starch-binding associating with outer membrane | SAMN03003324_01612 | Not Available | Negative | 1747865 - 1749232 | 50545.5 |
| tonb-linked outer membrane protein, susc/raga family | SAMN03003324_01613 | Not Available | Negative | 1749250 - 1752552 | 119719.0 |
| aromatic amino acid transport protein arop | SAMN03003324_01614 | Not Available | Negative | 1752751 - 1754208 | 53573.7 |
| hypothetical protein | SAMN03003324_01615 | Not Available | Positive | 1754364 - 1754639 | 10658.6 |
| mfs transporter, sugar porter (sp) family | SAMN03003324_01616 | Not Available | Negative | 1754721 - 1756058 | 49283.0 |
| hypothetical protein | SAMN03003324_01617 | Not Available | Positive | 1756386 - 1757033 | 23843.6 |
| hypothetical protein | SAMN03003324_01618 | Not Available | Negative | 1757027 - 1757332 | 10744.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

