Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter antarcticus |
| Strain | strain ATCC 51969 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1362221 bp
Thymine Count
1361672 bp
Guanine Count
914548 bp
Cytosine Count
930759 bp
Genome Length
4570120 bp
Protein-coding Genes
4074 genes
Non-Coding Genes
88 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fatty acid hydroxylase superfamily protein | SAMN03003324_01598 | Not Available | Positive | 1736185 - 1736547 | 14617.1 |
| fatty acid hydroxylase superfamily protein | SAMN03003324_01599 | Not Available | Positive | 1736502 - 1737401 | 35170.1 |
| rok family protein (putative glucokinase) | SAMN03003324_01600 | Not Available | Positive | 1737656 - 1738927 | 46393.9 |
| outer membrane protein beta-barrel domain-containing protein | SAMN03003324_01601 | Not Available | Negative | 1739013 - 1739627 | 21480.9 |
| nicotinamide mononucleotide transporter | SAMN03003324_01603 | Not Available | Positive | 1739979 - 1740611 | 24216.1 |
| acyl-coa dehydrogenase | SAMN03003324_01604 | Not Available | Positive | 1740604 - 1741692 | 40223.4 |
| sugar phosphate isomerase/epimerase | SAMN03003324_01605 | Not Available | Negative | 1741751 - 1742728 | 36311.5 |
| hexosaminidase | SAMN03003324_01606 | Not Available | Negative | 1742841 - 1744439 | 60622.9 |
| hypothetical protein | SAMN03003324_01607 | Not Available | Positive | 1744575 - 1745102 | 19427.6 |
| hypothetical protein | SAMN03003324_01608 | Not Available | Positive | 1745139 - 1745711 | 21263.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

