Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter antarcticus |
| Strain | strain ATCC 51969 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1362221 bp
Thymine Count
1361672 bp
Guanine Count
914548 bp
Cytosine Count
930759 bp
Genome Length
4570120 bp
Protein-coding Genes
4074 genes
Non-Coding Genes
88 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative hydrolase of the had superfamily | SAMN03003324_01588 | Not Available | Positive | 1724404 - 1725114 | 26356.9 |
| putative beta-lactamase-inhibitor-like, pepsy-like | SAMN03003324_01589 | Not Available | Negative | 1725166 - 1725600 | 16771.3 |
| alpha-l-fucosidase 2 | SAMN03003324_01590 | Not Available | Negative | 1725647 - 1728103 | 90524.4 |
| arac-type dna-binding protein | SAMN03003324_01591 | Not Available | Negative | 1728167 - 1729099 | 35430.9 |
| aldehyde dehydrogenase | SAMN03003324_01592 | Not Available | Positive | 1729200 - 1730705 | 55383.5 |
| hypothetical protein | SAMN03003324_01593 | Not Available | Positive | 1730781 - 1731155 | 13615.1 |
| hypothetical protein | SAMN03003324_01594 | Not Available | Positive | 1731229 - 1731435 | 7662.16 |
| choline dehydrogenase | SAMN03003324_01595 | Not Available | Positive | 1731832 - 1733571 | 63935.1 |
| gluconate 2-dehydrogenase subunit 3 | SAMN03003324_01596 | Not Available | Positive | 1733610 - 1734236 | 23096.7 |
| signal transduction histidine kinase | SAMN03003324_01597 | Not Available | Positive | 1734295 - 1736082 | 67781.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

