Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter antarcticus |
| Strain | strain ATCC 51969 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1362221 bp
Thymine Count
1361672 bp
Guanine Count
914548 bp
Cytosine Count
930759 bp
Genome Length
4570120 bp
Protein-coding Genes
4074 genes
Non-Coding Genes
88 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN03003324_00095 | Not Available | Negative | 98671 - 99003 | 12488.2 |
| protein of unknown function | SAMN03003324_00096 | Not Available | Negative | 99074 - 100294 | 43751.4 |
| outer membrane cobalamin receptor protein | SAMN03003324_00097 | Not Available | Negative | 100353 - 102815 | 92770.6 |
| uncharacterized conserved protein, contains gh25 family domain | SAMN03003324_00098 | Not Available | Negative | 102835 - 103548 | 26180.0 |
| satd family (satd) | SAMN03003324_00099 | Not Available | Positive | 103827 - 104459 | 23568.3 |
| protein of unknown function | SAMN03003324_00100 | Not Available | Positive | 104459 - 105250 | 29868.9 |
| phosphoglycerol transferase mdob | SAMN03003324_00101 | Not Available | Negative | 105259 - 107205 | 73561.9 |
| 3-hydroxyisobutyrate dehydrogenase | SAMN03003324_00102 | Not Available | Negative | 107284 - 108141 | 30008.4 |
| hypothetical protein | SAMN03003324_00103 | Not Available | Positive | 108297 - 108725 | 16407.0 |
| ubiquinone biosynthesis protein | SAMN03003324_00104 | Not Available | Negative | 108752 - 110413 | 62660.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

