Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter antarcticus |
| Strain | strain ATCC 51969 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1362221 bp
Thymine Count
1361672 bp
Guanine Count
914548 bp
Cytosine Count
930759 bp
Genome Length
4570120 bp
Protein-coding Genes
4074 genes
Non-Coding Genes
88 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| response regulator receiver domain-containing protein | SAMN03003324_01568 | Not Available | Negative | 1700668 - 1701135 | 18000.8 |
| thif family protein | SAMN03003324_01569 | Not Available | Positive | 1701260 - 1702399 | 42894.8 |
| hypothetical protein | SAMN03003324_01570 | Not Available | Positive | 1702413 - 1703120 | 26234.7 |
| hypothetical protein | SAMN03003324_01571 | Not Available | Positive | 1703107 - 1705263 | 81307.0 |
| his kinase a (phospho-acceptor) domain-containing protein | SAMN03003324_01572 | Not Available | Positive | 1705265 - 1706344 | 40609.6 |
| response regulator receiver domain-containing protein | SAMN03003324_01573 | Not Available | Positive | 1706334 - 1706747 | 15353.0 |
| hypothetical protein | SAMN03003324_01574 | Not Available | Positive | 1706855 - 1707154 | 11296.5 |
| h+/cl-antiporter clca | SAMN03003324_01575 | Not Available | Negative | 1707316 - 1708602 | 46335.9 |
| predicted dehydrogenase | SAMN03003324_01576 | Not Available | Negative | 1708980 - 1710332 | 50648.7 |
| hypothetical protein | SAMN03003324_01577 | Not Available | Negative | 1710356 - 1710976 | 23320.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

