Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter antarcticus |
| Strain | strain ATCC 51969 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1362221 bp
Thymine Count
1361672 bp
Guanine Count
914548 bp
Cytosine Count
930759 bp
Genome Length
4570120 bp
Protein-coding Genes
4074 genes
Non-Coding Genes
88 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN03003324_01558 | Not Available | Positive | 1691580 - 1693103 | 57866.6 |
| trna threonylcarbamoyladenosine biosynthesis protein tsab | SAMN03003324_01559 | Not Available | Negative | 1693150 - 1693833 | 24963.1 |
| ribonuclease p protein component | SAMN03003324_01560 | Not Available | Negative | 1694072 - 1694464 | 15464.2 |
| lsu ribosomal protein l34p | SAMN03003324_01561 | Not Available | Negative | 1694523 - 1694681 | 6233.64 |
| two component transcriptional regulator, lyttr family | SAMN03003324_01562 | Not Available | Negative | 1694836 - 1695570 | 27640.5 |
| histidine kinase | SAMN03003324_01563 | Not Available | Negative | 1695548 - 1696609 | 40602.3 |
| hypothetical protein | SAMN03003324_01564 | Not Available | Negative | 1696618 - 1697418 | 29364.7 |
| uncharacterized iron-regulated protein | SAMN03003324_01565 | Not Available | Positive | 1697541 - 1698500 | 36317.4 |
| large conductance mechanosensitive channel | SAMN03003324_01566 | Not Available | Negative | 1698535 - 1698981 | 16230.1 |
| rna polymerase, sigma 54 subunit, rpon/sigl | SAMN03003324_01567 | Not Available | Positive | 1699122 - 1700627 | 58004.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

