Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter antarcticus |
| Strain | strain ATCC 51969 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1362221 bp
Thymine Count
1361672 bp
Guanine Count
914548 bp
Cytosine Count
930759 bp
Genome Length
4570120 bp
Protein-coding Genes
4074 genes
Non-Coding Genes
88 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN03003324_01538 | Not Available | Negative | 1674806 - 1674982 | 6716.92 |
| lsu ribosomal protein l31p | SAMN03003324_01539 | Not Available | Negative | 1675101 - 1675349 | 9734.63 |
| hypothetical protein | SAMN03003324_01540 | Not Available | Negative | 1675433 - 1675720 | 11235.5 |
| cysteine desulfurase iscs | SAMN03003324_01541 | Not Available | Positive | 1675936 - 1677147 | 44074.8 |
| nitrogen fixation protein nifu | SAMN03003324_01542 | Not Available | Positive | 1677217 - 1677630 | 14864.8 |
| iron-sulfur cluster assembly protein | SAMN03003324_01543 | Not Available | Positive | 1677708 - 1678034 | 11870.8 |
| long-chain acyl-coa synthetase | SAMN03003324_01544 | Not Available | Positive | 1678173 - 1680086 | 71591.8 |
| hypothetical protein | SAMN03003324_01545 | Not Available | Negative | 1680049 - 1680186 | 5304.65 |
| lysyl-trna synthetase, class ii | SAMN03003324_01546 | Not Available | Positive | 1680189 - 1681916 | 65610.7 |
| hypothetical protein | SAMN03003324_01547 | Not Available | Positive | 1682014 - 1682226 | 8484.86 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

