Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter antarcticus |
| Strain | strain ATCC 51969 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1362221 bp
Thymine Count
1361672 bp
Guanine Count
914548 bp
Cytosine Count
930759 bp
Genome Length
4570120 bp
Protein-coding Genes
4074 genes
Non-Coding Genes
88 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN03003324_01518 | Not Available | Negative | 1655021 - 1655227 | 7581.57 |
| addiction module antidote protein, higa family | SAMN03003324_01519 | Not Available | Negative | 1655228 - 1655719 | 18781.2 |
| hypothetical protein | SAMN03003324_01520 | Not Available | Positive | 1655951 - 1656308 | 14071.3 |
| hypothetical protein | SAMN03003324_01521 | Not Available | Negative | 1656309 - 1656587 | 10480.5 |
| hypothetical protein | SAMN03003324_01522 | Not Available | Negative | 1656671 - 1657261 | 21732.4 |
| imp dehydrogenase | SAMN03003324_01523 | Not Available | Negative | 1657371 - 1658840 | 52327.5 |
| predicted zn-dependent peptidase | SAMN03003324_01524 | Not Available | Negative | 1659159 - 1660433 | 47787.9 |
| predicted zn-dependent peptidase | SAMN03003324_01525 | Not Available | Negative | 1660426 - 1661670 | 46769.5 |
| de-hypoxanthine futalosine cyclase | SAMN03003324_01526 | Not Available | Positive | 1661771 - 1662895 | 42274.8 |
| ferritin-like domain-containing protein | SAMN03003324_01527 | Not Available | Negative | 1662958 - 1663794 | 29678.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

