Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter antarcticus |
| Strain | strain ATCC 51969 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1362221 bp
Thymine Count
1361672 bp
Guanine Count
914548 bp
Cytosine Count
930759 bp
Genome Length
4570120 bp
Protein-coding Genes
4074 genes
Non-Coding Genes
88 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cupin-like domain-containing protein | SAMN03003324_01508 | Not Available | Negative | 1643916 - 1644797 | 34573.5 |
| oxygen-independent coproporphyrinogen-3 oxidase | SAMN03003324_01509 | Not Available | Negative | 1644991 - 1646139 | 43448.7 |
| transcriptional regulator, laci family | SAMN03003324_01510 | Not Available | Negative | 1646246 - 1647259 | 37418.1 |
| inositol oxygenase | SAMN03003324_01511 | Not Available | Positive | 1647444 - 1648316 | 34431.3 |
| acetyltransferase (gnat) domain-containing protein | SAMN03003324_01512 | Not Available | Negative | 1648409 - 1648915 | 19839.5 |
| putative abc transport system permease protein | SAMN03003324_01513 | Not Available | Positive | 1649134 - 1651482 | 87541.3 |
| dna-binding transcriptional regulator, marr family | SAMN03003324_01514 | Not Available | Negative | 1651510 - 1652031 | 20289.0 |
| acetyltransferase (gnat) family protein | SAMN03003324_01515 | Not Available | Negative | 1652003 - 1652491 | 18208.1 |
| protein of unknown function | SAMN03003324_01516 | Not Available | Positive | 1652648 - 1653637 | 38322.8 |
| uroporphyrinogen-iii synthase | SAMN03003324_01517 | Not Available | Positive | 1653647 - 1654417 | 29365.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

