Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter antarcticus |
| Strain | strain ATCC 51969 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1362221 bp
Thymine Count
1361672 bp
Guanine Count
914548 bp
Cytosine Count
930759 bp
Genome Length
4570120 bp
Protein-coding Genes
4074 genes
Non-Coding Genes
88 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| chemotaxis protein motb | SAMN03003324_01498 | Not Available | Positive | 1632513 - 1633358 | 31355.9 |
| dtdp-4-dehydrorhamnose 3,5-epimerase | SAMN03003324_01499 | Not Available | Negative | 1633479 - 1634033 | 20900.6 |
| protein of unknown function | SAMN03003324_01500 | Not Available | Negative | 1634038 - 1634340 | 11669.1 |
| dipeptidyl aminopeptidase/acylaminoacyl peptidase | SAMN03003324_01501 | Not Available | Positive | 1634563 - 1636485 | 73303.6 |
| two-component system, ompr family, phosphate regulon sensor histidine kinase phor | SAMN03003324_01502 | Not Available | Positive | 1636492 - 1638159 | 64287.8 |
| two-component system, ompr family, response regulator mtra | SAMN03003324_01503 | Not Available | Positive | 1638164 - 1638853 | 26549.4 |
| hypothetical protein | SAMN03003324_01504 | Not Available | Negative | 1638986 - 1640263 | 47701.4 |
| magnesium chelatase subunit i | SAMN03003324_01505 | Not Available | Negative | 1640268 - 1641758 | 55924.4 |
| hypothetical protein | SAMN03003324_01506 | Not Available | Negative | 1641773 - 1642867 | 41170.3 |
| cupin-like domain-containing protein | SAMN03003324_01507 | Not Available | Negative | 1642954 - 1643835 | 33611.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

