Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter antarcticus |
| Strain | strain ATCC 51969 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1362221 bp
Thymine Count
1361672 bp
Guanine Count
914548 bp
Cytosine Count
930759 bp
Genome Length
4570120 bp
Protein-coding Genes
4074 genes
Non-Coding Genes
88 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN03003324_01478 | Not Available | Negative | 1612565 - 1612807 | 9676.67 |
| homospermidine synthase (spermidine-specific) | SAMN03003324_01479 | Not Available | Positive | 1613264 - 1614244 | 36909.2 |
| cytochrome c | SAMN03003324_01480 | Not Available | Positive | 1614497 - 1615792 | 47941.1 |
| prokaryotic molybdopterin-containing oxidoreductase family, iron-sulfur binding subunit | SAMN03003324_01481 | Not Available | Positive | 1615837 - 1618866 | 110953.0 |
| quinol:cytochrome c oxidoreductase quinone-binding subunit 1 | SAMN03003324_01482 | Not Available | Positive | 1618890 - 1620362 | 55924.5 |
| protein of unknown function | SAMN03003324_01483 | Not Available | Positive | 1620365 - 1620901 | 19896.2 |
| cytochrome c oxidase, cbb3-type, subunit iii | SAMN03003324_01484 | Not Available | Positive | 1620873 - 1621478 | 21881.8 |
| hypothetical protein | SAMN03003324_01485 | Not Available | Positive | 1621493 - 1622707 | 45992.3 |
| cytochrome c oxidase subunit 2 | SAMN03003324_01486 | Not Available | Positive | 1622772 - 1624034 | 46565.9 |
| cytochrome c oxidase subunit 1 | SAMN03003324_01487 | Not Available | Positive | 1624055 - 1625944 | 70840.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

