Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter antarcticus |
| Strain | strain ATCC 51969 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1362221 bp
Thymine Count
1361672 bp
Guanine Count
914548 bp
Cytosine Count
930759 bp
Genome Length
4570120 bp
Protein-coding Genes
4074 genes
Non-Coding Genes
88 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| d-3-phosphoglycerate dehydrogenase | SAMN03003324_01458 | Not Available | Negative | 1589323 - 1590621 | 49267.9 |
| nucleoside-diphosphate-sugar epimerase | SAMN03003324_01459 | Not Available | Negative | 1590623 - 1591591 | 35335.8 |
| arginase family enzyme | SAMN03003324_01460 | Not Available | Positive | 1591663 - 1592847 | 44933.2 |
| phosphoribosylamine--glycine ligase | SAMN03003324_01461 | Not Available | Negative | 1592973 - 1594244 | 45457.7 |
| protein translocase subunit seca | SAMN03003324_01462 | Not Available | Positive | 1594504 - 1597812 | 124081.0 |
| sporulation related domain-containing protein | SAMN03003324_01463 | Not Available | Positive | 1597881 - 1598333 | 17252.2 |
| amidohydrolase | SAMN03003324_01464 | Not Available | Positive | 1598338 - 1599525 | 43058.7 |
| hypothetical protein | SAMN03003324_01465 | Not Available | Positive | 1599543 - 1600475 | 36307.9 |
| lysophospholipase l1 | SAMN03003324_01466 | Not Available | Positive | 1600537 - 1601208 | 24139.6 |
| dna primase | SAMN03003324_01467 | Not Available | Positive | 1601214 - 1603181 | 74422.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

