Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter antarcticus |
| Strain | strain ATCC 51969 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1362221 bp
Thymine Count
1361672 bp
Guanine Count
914548 bp
Cytosine Count
930759 bp
Genome Length
4570120 bp
Protein-coding Genes
4074 genes
Non-Coding Genes
88 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nitronate monooxygenase | SAMN03003324_01448 | Not Available | Negative | 1581482 - 1582549 | 38135.8 |
| hypothetical protein | SAMN03003324_01449 | Not Available | Negative | 1582586 - 1582969 | 14545.3 |
| uncharacterized conserved protein ybjt, contains nad(p)-binding and duf2867 domains | SAMN03003324_01450 | Not Available | Negative | 1583076 - 1583957 | 31752.8 |
| ketosteroid isomerase-related protein | SAMN03003324_01451 | Not Available | Negative | 1583962 - 1584408 | 17132.2 |
| transcriptional regulator, hxlr family | SAMN03003324_01452 | Not Available | Positive | 1584498 - 1584920 | 16127.0 |
| cubico group peptidase, beta-lactamase class c family | SAMN03003324_01453 | Not Available | Negative | 1584975 - 1586072 | 41000.8 |
| transcriptional regulator, tetr family | SAMN03003324_01454 | Not Available | Positive | 1586332 - 1586964 | 24108.0 |
| transcriptional regulator, hxlr family | SAMN03003324_01455 | Not Available | Negative | 1587053 - 1587433 | 14396.5 |
| putative nadph-quinone reductase (modulator of drug activity b) | SAMN03003324_01456 | Not Available | Positive | 1587465 - 1588061 | 23254.0 |
| branched-chain amino acid aminotransferase | SAMN03003324_01457 | Not Available | Negative | 1588154 - 1589266 | 40804.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

