Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter antarcticus |
| Strain | strain ATCC 51969 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1362221 bp
Thymine Count
1361672 bp
Guanine Count
914548 bp
Cytosine Count
930759 bp
Genome Length
4570120 bp
Protein-coding Genes
4074 genes
Non-Coding Genes
88 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| alpha-l-fucosidase | SAMN03003324_01438 | Not Available | Negative | 1570236 - 1571561 | 50213.6 |
| dipeptidyl-peptidase-4 | SAMN03003324_01439 | Not Available | Negative | 1571933 - 1574047 | 79957.3 |
| heat shock protein hslj | SAMN03003324_01440 | Not Available | Negative | 1574116 - 1574895 | 29278.6 |
| dna-binding transcriptional regulator, lysr family | SAMN03003324_01441 | Not Available | Negative | 1575554 - 1576468 | 34965.3 |
| quaternary ammonium compound-resistance protein suge | SAMN03003324_01442 | Not Available | Positive | 1576702 - 1577028 | 11491.7 |
| ribosomal protein s18 acetylase rimi | SAMN03003324_01443 | Not Available | Positive | 1577054 - 1577602 | 21052.1 |
| hypothetical protein | SAMN03003324_01444 | Not Available | Negative | 1577684 - 1578724 | 38230.6 |
| dna-binding transcriptional regulator, lysr family | SAMN03003324_01445 | Not Available | Negative | 1578849 - 1579754 | 33887.4 |
| pimeloyl-acp methyl ester carboxylesterase | SAMN03003324_01446 | Not Available | Positive | 1579821 - 1580789 | 36331.7 |
| hypothetical protein | SAMN03003324_01447 | Not Available | Positive | 1580881 - 1581291 | 16381.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

