Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter antarcticus |
| Strain | strain ATCC 51969 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1362221 bp
Thymine Count
1361672 bp
Guanine Count
914548 bp
Cytosine Count
930759 bp
Genome Length
4570120 bp
Protein-coding Genes
4074 genes
Non-Coding Genes
88 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rna polymerase sigma-70 factor, ecf subfamily | SAMN03003324_01388 | Not Available | Negative | 1515809 - 1516324 | 19940.2 |
| inorganic phosphate transporter, pit family | SAMN03003324_01389 | Not Available | Negative | 1517021 - 1518031 | 35578.3 |
| hypothetical protein | SAMN03003324_01390 | Not Available | Negative | 1518044 - 1518685 | 23991.8 |
| two-component system, ompr family, phosphate regulon sensor histidine kinase phor | SAMN03003324_01391 | Not Available | Negative | 1518772 - 1519797 | 39390.9 |
| probable dna metabolism protein | SAMN03003324_01392 | Not Available | Negative | 1519852 - 1520613 | 30129.1 |
| putative dna modification/repair radical sam protein | SAMN03003324_01393 | Not Available | Negative | 1520629 - 1521885 | 48077.2 |
| uncharacterized protein | SAMN03003324_01394 | Not Available | Negative | 1521938 - 1522597 | 24981.8 |
| putative n6-adenine-specific dna methylase | SAMN03003324_01395 | Not Available | Negative | 1522628 - 1523833 | 45220.3 |
| protein of unknown function | SAMN03003324_01396 | Not Available | Positive | 1523906 - 1524274 | 13672.9 |
| two-component system, ompr family, phosphate regulon sensor histidine kinase phor | SAMN03003324_01397 | Not Available | Positive | 1524447 - 1526270 | 69935.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

