Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter antarcticus |
| Strain | strain ATCC 51969 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1362221 bp
Thymine Count
1361672 bp
Guanine Count
914548 bp
Cytosine Count
930759 bp
Genome Length
4570120 bp
Protein-coding Genes
4074 genes
Non-Coding Genes
88 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pyruvate dehydrogenase e2 component (dihydrolipoamide acetyltransferase) | SAMN03003324_01368 | Not Available | Positive | 1494043 - 1495689 | 57606.1 |
| histidyl-trna synthetase | SAMN03003324_01369 | Not Available | Positive | 1495732 - 1497165 | 52905.8 |
| dienelactone hydrolase | SAMN03003324_01370 | Not Available | Negative | 1497162 - 1497932 | 27811.1 |
| dna end-binding protein ku | SAMN03003324_01371 | Not Available | Positive | 1497945 - 1498772 | 31510.3 |
| twitching motility two-component system response regulator pilg | SAMN03003324_01372 | Not Available | Negative | 1498773 - 1499156 | 14273.3 |
| phosphotransferase enzyme family protein | SAMN03003324_01373 | Not Available | Negative | 1499249 - 1500559 | 50304.4 |
| dna-binding transcriptional regulator, acrr family | SAMN03003324_01374 | Not Available | Negative | 1500571 - 1501344 | 29830.6 |
| iron complex outermembrane recepter protein | SAMN03003324_01375 | Not Available | Positive | 1501845 - 1504163 | 85504.2 |
| pimeloyl-acp methyl ester carboxylesterase | SAMN03003324_01376 | Not Available | Positive | 1504368 - 1505357 | 36907.7 |
| predicted dehydrogenase | SAMN03003324_01377 | Not Available | Negative | 1505425 - 1506438 | 37721.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

