Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter antarcticus |
| Strain | strain ATCC 51969 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1362221 bp
Thymine Count
1361672 bp
Guanine Count
914548 bp
Cytosine Count
930759 bp
Genome Length
4570120 bp
Protein-coding Genes
4074 genes
Non-Coding Genes
88 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycosyltransferase, gt2 family | SAMN03003324_01348 | Not Available | Negative | 1470867 - 1471829 | 36467.7 |
| atp-binding cassette, subfamily b, msba | SAMN03003324_01349 | Not Available | Negative | 1471945 - 1473777 | 67781.0 |
| glycosyl transferase family 2 | SAMN03003324_01350 | Not Available | Negative | 1473797 - 1474594 | 30468.3 |
| glycosyl transferase family 2 | SAMN03003324_01351 | Not Available | Negative | 1474624 - 1475526 | 34950.7 |
| glycosyltransferase sugar-binding region containing dxd motif-containing protein | SAMN03003324_01352 | Not Available | Negative | 1475729 - 1476334 | 23554.0 |
| ompa-ompf porin, oop family | SAMN03003324_01353 | Not Available | Positive | 1476947 - 1478290 | 47778.7 |
| 2-iminobutanoate/2-iminopropanoate deaminase | SAMN03003324_01354 | Not Available | Positive | 1478553 - 1478933 | 13700.6 |
| chloramphenicol-sensitive protein rard | SAMN03003324_01355 | Not Available | Positive | 1478935 - 1479840 | 34046.9 |
| atp-dependent dna helicase recg | SAMN03003324_01356 | Not Available | Positive | 1479845 - 1481950 | 79910.8 |
| cubico group peptidase, beta-lactamase class c family | SAMN03003324_01357 | Not Available | Negative | 1481947 - 1483155 | 45740.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

