Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter antarcticus |
| Strain | strain ATCC 51969 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1362221 bp
Thymine Count
1361672 bp
Guanine Count
914548 bp
Cytosine Count
930759 bp
Genome Length
4570120 bp
Protein-coding Genes
4074 genes
Non-Coding Genes
88 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| l-aspartate 1-decarboxylase | SAMN03003324_01338 | Not Available | Positive | 1459918 - 1460268 | 12921.9 |
| acyl-coa dehydrogenase | SAMN03003324_01339 | Not Available | Positive | 1460344 - 1461483 | 41478.7 |
| putative membrane protein | SAMN03003324_01340 | Not Available | Negative | 1461747 - 1462094 | 12006.6 |
| hypothetical protein | SAMN03003324_01341 | Not Available | Positive | 1462113 - 1462538 | 15698.0 |
| ribosome maturation factor rimp | SAMN03003324_01342 | Not Available | Positive | 1462726 - 1463190 | 17378.0 |
| nusa antitermination factor | SAMN03003324_01343 | Not Available | Positive | 1463192 - 1464427 | 46768.8 |
| bacterial translation initiation factor 2 (bif-2) | SAMN03003324_01344 | Not Available | Positive | 1464650 - 1467688 | 109401.0 |
| glycosyl transferase family 2 | SAMN03003324_01345 | Not Available | Negative | 1467763 - 1468776 | 38425.1 |
| glycosyl transferase family 11 | SAMN03003324_01346 | Not Available | Negative | 1468761 - 1469615 | 33659.3 |
| glycosyltransferase involved in cell wall bisynthesis | SAMN03003324_01347 | Not Available | Negative | 1469642 - 1470817 | 45265.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

