Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter antarcticus |
| Strain | strain ATCC 51969 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1362221 bp
Thymine Count
1361672 bp
Guanine Count
914548 bp
Cytosine Count
930759 bp
Genome Length
4570120 bp
Protein-coding Genes
4074 genes
Non-Coding Genes
88 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| starch-binding associating with outer membrane | SAMN03003324_01317 | Not Available | Positive | 1433691 - 1435244 | 58122.8 |
| alpha-n-arabinofuranosidase | SAMN03003324_01318 | Not Available | Positive | 1435297 - 1436844 | 57211.5 |
| glycosyl hydrolases family 43 | SAMN03003324_01319 | Not Available | Positive | 1436866 - 1437843 | 36787.3 |
| alpha-l-arabinofuranosidase | SAMN03003324_01320 | Not Available | Positive | 1437845 - 1439836 | 74169.5 |
| arabinan endo-1,5-alpha-l-arabinosidase | SAMN03003324_01321 | Not Available | Positive | 1439850 - 1440875 | 37859.0 |
| transmembrane secretion effector | SAMN03003324_01322 | Not Available | Negative | 1440905 - 1442203 | 47568.3 |
| thiamine-phosphate diphosphorylase | SAMN03003324_01323 | Not Available | Negative | 1442248 - 1442961 | 25921.2 |
| iron complex outermembrane recepter protein | SAMN03003324_01324 | Not Available | Negative | 1443012 - 1445564 | 95237.1 |
| nicotinamide-nucleotide adenylyltransferase, nadr type | SAMN03003324_01326 | Not Available | Negative | 1445683 - 1446207 | 20076.0 |
| carbamoyl-phosphate synthase large subunit | SAMN03003324_01327 | Not Available | Positive | 1446865 - 1449681 | 104252.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

