Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter antarcticus |
| Strain | strain ATCC 51969 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1362221 bp
Thymine Count
1361672 bp
Guanine Count
914548 bp
Cytosine Count
930759 bp
Genome Length
4570120 bp
Protein-coding Genes
4074 genes
Non-Coding Genes
88 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN03003324_01307 | Not Available | Positive | 1422437 - 1422808 | 13776.7 |
| large subunit ribosomal protein l13 | SAMN03003324_01308 | Not Available | Positive | 1422899 - 1423342 | 16276.8 |
| small subunit ribosomal protein s9 | SAMN03003324_01309 | Not Available | Positive | 1423359 - 1423745 | 14371.7 |
| ssu ribosomal protein s2p | SAMN03003324_01310 | Not Available | Positive | 1423766 - 1424590 | 30461.8 |
| translation elongation factor ts (ef-ts) | SAMN03003324_01311 | Not Available | Positive | 1424696 - 1425532 | 30329.3 |
| n-acetylglucosamine 6-phosphate deacetylase | SAMN03003324_01312 | Not Available | Positive | 1425668 - 1426783 | 40103.5 |
| uridylate kinase | SAMN03003324_01313 | Not Available | Positive | 1426811 - 1427518 | 25876.7 |
| ribosome recycling factor | SAMN03003324_01314 | Not Available | Positive | 1427555 - 1428118 | 20979.4 |
| atp-binding cassette, subfamily b | SAMN03003324_01315 | Not Available | Positive | 1428329 - 1430020 | 62956.7 |
| tonb-linked outer membrane protein, susc/raga family | SAMN03003324_01316 | Not Available | Positive | 1430456 - 1433596 | 114976.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

