Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter antarcticus |
| Strain | strain ATCC 51969 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1362221 bp
Thymine Count
1361672 bp
Guanine Count
914548 bp
Cytosine Count
930759 bp
Genome Length
4570120 bp
Protein-coding Genes
4074 genes
Non-Coding Genes
88 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rhodanese-related sulfurtransferase | SAMN03003324_01297 | Not Available | Positive | 1414029 - 1414346 | 11866.2 |
| hypothetical protein | SAMN03003324_01298 | Not Available | Positive | 1414349 - 1414576 | 8520.74 |
| l-alanine-dl-glutamate epimerase | SAMN03003324_01299 | Not Available | Negative | 1414557 - 1415591 | 37828.0 |
| hypothetical protein | SAMN03003324_01300 | Not Available | Positive | 1415668 - 1416636 | 36848.3 |
| rhomboid family protein | SAMN03003324_01301 | Not Available | Negative | 1416633 - 1417253 | 23392.9 |
| peptidase t. metallo peptidase. merops family m20b | SAMN03003324_01302 | Not Available | Positive | 1417416 - 1418669 | 45601.2 |
| methyltransferase domain-containing protein | SAMN03003324_01303 | Not Available | Negative | 1418746 - 1419438 | 26456.2 |
| small-conductance mechanosensitive channel | SAMN03003324_01304 | Not Available | Negative | 1419451 - 1420557 | 42268.3 |
| metallo-beta-lactamase family protein | SAMN03003324_01305 | Not Available | Negative | 1420570 - 1422018 | 53618.2 |
| ytxh-like protein | SAMN03003324_01306 | Not Available | Negative | 1422116 - 1422322 | 7062.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

