Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter antarcticus |
| Strain | strain ATCC 51969 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1362221 bp
Thymine Count
1361672 bp
Guanine Count
914548 bp
Cytosine Count
930759 bp
Genome Length
4570120 bp
Protein-coding Genes
4074 genes
Non-Coding Genes
88 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uncharacterized protein, duf1810 family | SAMN03003324_00065 | Not Available | Positive | 67487 - 67921 | 16630.0 |
| putative intracellular protease/amidase | SAMN03003324_00066 | Not Available | Negative | 67926 - 68627 | 25449.1 |
| hypothetical protein | SAMN03003324_00067 | Not Available | Negative | 68749 - 69576 | 30978.9 |
| predicted oxidoreductase | SAMN03003324_00068 | Not Available | Negative | 69726 - 70727 | 36783.8 |
| membrane dipeptidase | SAMN03003324_00069 | Not Available | Negative | 70965 - 72038 | 39829.4 |
| d-serine deaminase, pyridoxal phosphate-dependent | SAMN03003324_00070 | Not Available | Negative | 72047 - 73165 | 41680.5 |
| enamine deaminase rida, house cleaning of reactive enamine intermediates, yjgf/yer057c/uk114 family | SAMN03003324_00071 | Not Available | Negative | 73174 - 73647 | 17179.8 |
| gnt-i system high-affinity gluconate transporter | SAMN03003324_00072 | Not Available | Negative | 73657 - 74970 | 46171.9 |
| hexosaminidase | SAMN03003324_00073 | Not Available | Negative | 74979 - 77306 | 88275.3 |
| gluconate 2-dehydrogenase subunit 3 | SAMN03003324_00074 | Not Available | Negative | 77441 - 78016 | 21204.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

