Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter antarcticus |
| Strain | strain ATCC 51969 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1362221 bp
Thymine Count
1361672 bp
Guanine Count
914548 bp
Cytosine Count
930759 bp
Genome Length
4570120 bp
Protein-coding Genes
4074 genes
Non-Coding Genes
88 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| predicted glycosyl hydrolase, gh43/duf377 family | SAMN03003324_01277 | Not Available | Positive | 1390417 - 1391541 | 42081.8 |
| hypothetical protein | SAMN03003324_01278 | Not Available | Negative | 1391627 - 1392088 | 17315.7 |
| camp-binding domain of crp or a regulatory subunit of camp-dependent protein kinases | SAMN03003324_01279 | Not Available | Positive | 1392207 - 1392824 | 23819.8 |
| nucleoside-diphosphate-sugar epimerase | SAMN03003324_01280 | Not Available | Positive | 1392935 - 1393864 | 34957.2 |
| hypothetical protein | SAMN03003324_01281 | Not Available | Positive | 1394016 - 1394477 | 17201.9 |
| ompa-ompf porin, oop family | SAMN03003324_01282 | Not Available | Negative | 1394726 - 1395259 | 19118.8 |
| tat (twin-arginine translocation) pathway signal sequence | SAMN03003324_01283 | Not Available | Positive | 1395569 - 1396840 | 47613.8 |
| heat repeat | SAMN03003324_01284 | Not Available | Positive | 1396878 - 1400309 | 123206.0 |
| oxidoreductase family, nad-binding rossmann fold | SAMN03003324_01285 | Not Available | Positive | 1400335 - 1401825 | 55412.1 |
| predicted dehydrogenase | SAMN03003324_01286 | Not Available | Positive | 1401838 - 1402920 | 39784.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

