Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter antarcticus |
| Strain | strain ATCC 51969 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1362221 bp
Thymine Count
1361672 bp
Guanine Count
914548 bp
Cytosine Count
930759 bp
Genome Length
4570120 bp
Protein-coding Genes
4074 genes
Non-Coding Genes
88 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| predicted pyrophosphatase or phosphodiesterase, alkp superfamily | SAMN03003324_01267 | Not Available | Positive | 1379169 - 1380542 | 51632.8 |
| protein of unknown function | SAMN03003324_01268 | Not Available | Positive | 1380686 - 1381336 | 25185.3 |
| o-acetyl-adp-ribose deacetylase (regulator of rnase iii), contains macro domain | SAMN03003324_01269 | Not Available | Positive | 1381333 - 1382382 | 40134.8 |
| alpha-1,2-mannosidase, putative | SAMN03003324_01270 | Not Available | Negative | 1382474 - 1384774 | 87120.5 |
| alpha-l-fucosidase | SAMN03003324_01271 | Not Available | Positive | 1384886 - 1386355 | 55669.2 |
| hypothetical protein | SAMN03003324_01272 | Not Available | Positive | 1386453 - 1386836 | 14436.5 |
| hypothetical protein | SAMN03003324_01273 | Not Available | Positive | 1387053 - 1387904 | 31139.6 |
| cytochrome c peroxidase | SAMN03003324_01274 | Not Available | Positive | 1387909 - 1388955 | 39264.8 |
| hypothetical protein | SAMN03003324_01275 | Not Available | Positive | 1389001 - 1389927 | 34046.6 |
| hypothetical protein | SAMN03003324_01276 | Not Available | Positive | 1389940 - 1390371 | 16595.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

