Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter antarcticus |
| Strain | strain ATCC 51969 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1362221 bp
Thymine Count
1361672 bp
Guanine Count
914548 bp
Cytosine Count
930759 bp
Genome Length
4570120 bp
Protein-coding Genes
4074 genes
Non-Coding Genes
88 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tonb-linked outer membrane protein, susc/raga family | SAMN03003324_01257 | Not Available | Positive | 1364661 - 1368071 | 122995.0 |
| starch-binding associating with outer membrane | SAMN03003324_01258 | Not Available | Positive | 1368097 - 1369890 | 66282.9 |
| cytochrome c, mono-and diheme variants | SAMN03003324_01259 | Not Available | Positive | 1370075 - 1372240 | 79962.6 |
| protein of unknown function | SAMN03003324_01260 | Not Available | Positive | 1372270 - 1373625 | 50573.9 |
| transmembrane family 220, helix | SAMN03003324_01261 | Not Available | Positive | 1373808 - 1374179 | 14077.5 |
| hypothetical protein | SAMN03003324_01262 | Not Available | Positive | 1374189 - 1374881 | 25754.3 |
| hypothetical protein | SAMN03003324_01263 | Not Available | Positive | 1374902 - 1375888 | 36812.7 |
| 4-hydroxybenzoate polyprenyltransferase | SAMN03003324_01264 | Not Available | Positive | 1375899 - 1376777 | 31783.5 |
| 3-dehydroquinate synthase | SAMN03003324_01265 | Not Available | Positive | 1376790 - 1377956 | 42928.6 |
| hypothetical protein | SAMN03003324_01266 | Not Available | Positive | 1377958 - 1379172 | 46153.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

