Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter antarcticus |
| Strain | strain ATCC 51969 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1362221 bp
Thymine Count
1361672 bp
Guanine Count
914548 bp
Cytosine Count
930759 bp
Genome Length
4570120 bp
Protein-coding Genes
4074 genes
Non-Coding Genes
88 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pld-like domain-containing protein | SAMN03003324_01237 | Not Available | Negative | 1342672 - 1344666 | 76138.8 |
| hypothetical protein | SAMN03003324_01238 | Not Available | Negative | 1344710 - 1344913 | 7717.92 |
| hypothetical protein | SAMN03003324_01239 | Not Available | Negative | 1345093 - 1346157 | 41324.3 |
| hypothetical protein | SAMN03003324_01240 | Not Available | Negative | 1346178 - 1347026 | 32497.9 |
| dna-binding response regulator, narl/fixj family, contains rec and hth domains | SAMN03003324_01241 | Not Available | Negative | 1347527 - 1348195 | 24973.1 |
| tetratricopeptide repeat-containing protein | SAMN03003324_01242 | Not Available | Negative | 1348204 - 1349880 | 64883.8 |
| hypothetical protein | SAMN03003324_01243 | Not Available | Negative | 1350029 - 1350181 | 5302.2 |
| outer membrane protein assembly factor bamb, contains pqq-like beta-propeller repeat | SAMN03003324_01244 | Not Available | Positive | 1350903 - 1352051 | 41809.1 |
| hypothetical protein | SAMN03003324_01245 | Not Available | Positive | 1352199 - 1352375 | 6539.56 |
| hypothetical protein | SAMN03003324_01246 | Not Available | Positive | 1352811 - 1353152 | 12772.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

