Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter antarcticus |
| Strain | strain ATCC 51969 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1362221 bp
Thymine Count
1361672 bp
Guanine Count
914548 bp
Cytosine Count
930759 bp
Genome Length
4570120 bp
Protein-coding Genes
4074 genes
Non-Coding Genes
88 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| atp-binding protein involved in chromosome partitioning | SAMN03003324_01197 | Not Available | Positive | 1296613 - 1297689 | 38187.2 |
| fe-s cluster biogenesis protein nfua, 4fe-4s-binding domain | SAMN03003324_01198 | Not Available | Positive | 1297723 - 1297968 | 8732.76 |
| hypothetical protein | SAMN03003324_01199 | Not Available | Positive | 1298023 - 1298664 | 23876.8 |
| peptide deformylase | SAMN03003324_01200 | Not Available | Negative | 1298661 - 1299224 | 21684.3 |
| predicted zn-dependent peptidase | SAMN03003324_01201 | Not Available | Negative | 1299243 - 1300472 | 45959.1 |
| hypothetical protein | SAMN03003324_01202 | Not Available | Negative | 1300523 - 1301698 | 43078.2 |
| predicted membrane protein | SAMN03003324_01203 | Not Available | Negative | 1301698 - 1302666 | 37285.3 |
| molecular chaperone htpg | SAMN03003324_01204 | Not Available | Positive | 1302770 - 1304659 | 70805.2 |
| oligopeptidase b | SAMN03003324_01205 | Not Available | Negative | 1304943 - 1307051 | 80168.7 |
| thiol-disulfide isomerase or thioredoxin | SAMN03003324_01206 | Not Available | Positive | 1307095 - 1307637 | 20288.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

