Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter antarcticus |
| Strain | strain ATCC 51969 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1362221 bp
Thymine Count
1361672 bp
Guanine Count
914548 bp
Cytosine Count
930759 bp
Genome Length
4570120 bp
Protein-coding Genes
4074 genes
Non-Coding Genes
88 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN03003324_01177 | Not Available | Positive | 1277642 - 1279147 | 56240.4 |
| hypothetical protein | SAMN03003324_01178 | Not Available | Negative | 1279136 - 1279978 | 30584.0 |
| 3-oxoacyl-[acyl-carrier-protein] synthase-3 | SAMN03003324_01179 | Not Available | Negative | 1280039 - 1281121 | 39541.6 |
| l-lactate dehydrogenase complex protein lldg | SAMN03003324_01180 | Not Available | Negative | 1281186 - 1281830 | 24562.7 |
| membrane protease ftsh catalytic subunit | SAMN03003324_01181 | Not Available | Negative | 1281893 - 1283983 | 76885.5 |
| ribosome-associated protein | SAMN03003324_01182 | Not Available | Negative | 1284016 - 1284390 | 14272.8 |
| bira family transcriptional regulator, biotin operon repressor / biotin-[acetyl-coa-carboxylase] ligase | SAMN03003324_01183 | Not Available | Positive | 1284435 - 1285214 | 28695.5 |
| disulphide bond corrector protein dsbc | SAMN03003324_01184 | Not Available | Positive | 1285240 - 1285689 | 16716.6 |
| thiol:disulfide interchange protein dsbd | SAMN03003324_01185 | Not Available | Positive | 1286186 - 1287883 | 61671.9 |
| 6-phosphofructokinase | SAMN03003324_01186 | Not Available | Positive | 1287890 - 1288873 | 35226.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

