Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter antarcticus |
| Strain | strain ATCC 51969 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1362221 bp
Thymine Count
1361672 bp
Guanine Count
914548 bp
Cytosine Count
930759 bp
Genome Length
4570120 bp
Protein-coding Genes
4074 genes
Non-Coding Genes
88 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein of unknown function | SAMN03003324_01117 | Not Available | Negative | 1206807 - 1207367 | 20388.7 |
| hypothetical protein | SAMN03003324_01118 | Not Available | Negative | 1207427 - 1207606 | 6623.1 |
| transcriptional regulator, tetr family | SAMN03003324_01119 | Not Available | Positive | 1207808 - 1208428 | 23524.9 |
| outer membrane protein tolc | SAMN03003324_01120 | Not Available | Positive | 1208425 - 1209741 | 48735.5 |
| membrane fusion protein, multidrug efflux system | SAMN03003324_01121 | Not Available | Positive | 1209762 - 1210826 | 38723.0 |
| mfs transporter, dha2 family, multidrug resistance protein | SAMN03003324_01122 | Not Available | Positive | 1210832 - 1212379 | 56167.5 |
| phosphoenolpyruvate carboxylase, type 1 | SAMN03003324_01123 | Not Available | Positive | 1212663 - 1215248 | 97914.6 |
| alkyl hydroperoxide reductase subunit d | SAMN03003324_01124 | Not Available | Negative | 1215385 - 1215969 | 21437.7 |
| peroxiredoxin (alkyl hydroperoxide reductase subunit c) | SAMN03003324_01125 | Not Available | Negative | 1216043 - 1216588 | 20492.2 |
| dipeptidyl aminopeptidase/acylaminoacyl peptidase | SAMN03003324_01126 | Not Available | Negative | 1216730 - 1219075 | 88286.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

