Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter antarcticus |
| Strain | strain ATCC 51969 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1362221 bp
Thymine Count
1361672 bp
Guanine Count
914548 bp
Cytosine Count
930759 bp
Genome Length
4570120 bp
Protein-coding Genes
4074 genes
Non-Coding Genes
88 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| signal transduction histidine kinase | SAMN03003324_01107 | Not Available | Negative | 1195478 - 1199086 | 134384.0 |
| signal transduction histidine kinase | SAMN03003324_01108 | Not Available | Negative | 1199095 - 1200219 | 42338.2 |
| hypothetical protein | SAMN03003324_01109 | Not Available | Negative | 1200345 - 1201190 | 30552.8 |
| glutamyl-trna synthetase | SAMN03003324_01110 | Not Available | Negative | 1201307 - 1202815 | 56557.7 |
| histidine kinase-, dna gyrase b-, and hsp90-like atpase | SAMN03003324_01111 | Not Available | Positive | 1202904 - 1204118 | 46703.2 |
| dinb superfamily protein | SAMN03003324_01112 | Not Available | Positive | 1204099 - 1204602 | 19290.1 |
| 1,4-dihydroxy-2-naphthoyl-coa hydrolase | SAMN03003324_01113 | Not Available | Positive | 1204599 - 1205024 | 15459.7 |
| hypothetical protein | SAMN03003324_01114 | Not Available | Negative | 1205054 - 1205398 | 12738.1 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN03003324_01115 | Not Available | Positive | 1205663 - 1206247 | 22300.7 |
| hypothetical protein | SAMN03003324_01116 | Not Available | Positive | 1206244 - 1206750 | 19401.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

