Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter antarcticus |
| Strain | strain ATCC 51969 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1362221 bp
Thymine Count
1361672 bp
Guanine Count
914548 bp
Cytosine Count
930759 bp
Genome Length
4570120 bp
Protein-coding Genes
4074 genes
Non-Coding Genes
88 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ytxh-like protein | SAMN03003324_01097 | Not Available | Negative | 1184596 - 1184862 | 9441.16 |
| two-component system, ntrc family, response regulator hydg | SAMN03003324_01098 | Not Available | Negative | 1185160 - 1186569 | 52083.3 |
| enoyl-coa hydratase | SAMN03003324_01099 | Not Available | Negative | 1186736 - 1187518 | 27462.1 |
| glutaminyl-trna synthetase | SAMN03003324_01100 | Not Available | Positive | 1187665 - 1189326 | 63898.4 |
| n-acetylmuramoyl-l-alanine amidase | SAMN03003324_01101 | Not Available | Negative | 1190560 - 1191393 | 30813.2 |
| peptidase family m49 | SAMN03003324_01102 | Not Available | Positive | 1191513 - 1193198 | 62432.0 |
| two-component system, cell cycle response regulator divk | SAMN03003324_01103 | Not Available | Negative | 1193312 - 1193680 | 13643.1 |
| cheb methylesterase | SAMN03003324_01104 | Not Available | Negative | 1193693 - 1194274 | 20942.3 |
| mcp methyltransferase, cher-type | SAMN03003324_01105 | Not Available | Negative | 1194256 - 1195083 | 32058.6 |
| response regulator receiver domain-containing protein | SAMN03003324_01106 | Not Available | Negative | 1195083 - 1195454 | 13396.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

