Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter antarcticus |
| Strain | strain ATCC 51969 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1362221 bp
Thymine Count
1361672 bp
Guanine Count
914548 bp
Cytosine Count
930759 bp
Genome Length
4570120 bp
Protein-coding Genes
4074 genes
Non-Coding Genes
88 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN03003324_01087 | Not Available | Positive | 1174439 - 1176277 | 71339.7 |
| tyrosine-protein phosphatase ywqe | SAMN03003324_01088 | Not Available | Positive | 1176510 - 1177256 | 28539.5 |
| hypothetical protein | SAMN03003324_01089 | Not Available | Negative | 1177357 - 1178412 | 41021.0 |
| membrane protein terc, possibly involved in tellurium resistance | SAMN03003324_01090 | Not Available | Negative | 1178502 - 1179284 | 28880.4 |
| hypothetical protein | SAMN03003324_01091 | Not Available | Negative | 1179366 - 1180643 | 46835.4 |
| hypothetical protein | SAMN03003324_01092 | Not Available | Negative | 1180676 - 1181209 | 20340.6 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN03003324_01093 | Not Available | Negative | 1181199 - 1181756 | 21689.2 |
| aspartyl-trna synthetase | SAMN03003324_01094 | Not Available | Positive | 1181861 - 1183648 | 67845.4 |
| hypothetical protein | SAMN03003324_01095 | Not Available | Negative | 1183730 - 1184170 | 16107.9 |
| hypothetical protein | SAMN03003324_01096 | Not Available | Negative | 1184154 - 1184534 | 14573.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

