Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter antarcticus |
| Strain | strain ATCC 51969 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1362221 bp
Thymine Count
1361672 bp
Guanine Count
914548 bp
Cytosine Count
930759 bp
Genome Length
4570120 bp
Protein-coding Genes
4074 genes
Non-Coding Genes
88 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acetylornithine aminotransferase | SAMN03003324_01067 | Not Available | Negative | 1155598 - 1156731 | 41312.6 |
| n-acetyl-gamma-glutamyl-phosphate reductase | SAMN03003324_01068 | Not Available | Negative | 1156808 - 1157779 | 35018.8 |
| argininosuccinate synthase | SAMN03003324_01069 | Not Available | Negative | 1157769 - 1158962 | 44060.5 |
| hypothetical protein | SAMN03003324_01070 | Not Available | Negative | 1159096 - 1159803 | 26659.3 |
| glycine/d-amino acid oxidase | SAMN03003324_01071 | Not Available | Negative | 1160217 - 1161419 | 44748.1 |
| 2,4-dienoyl-coa reductase | SAMN03003324_01072 | Not Available | Positive | 1161565 - 1162695 | 41370.3 |
| hypothetical protein | SAMN03003324_01073 | Not Available | Positive | 1162797 - 1163102 | 10918.0 |
| l-ascorbate metabolism protein ulag, beta-lactamase superfamily | SAMN03003324_01074 | Not Available | Positive | 1163151 - 1163828 | 24527.3 |
| dna polymerase i | SAMN03003324_01075 | Not Available | Negative | 1163898 - 1166708 | 104311.0 |
| caax protease self-immunity | SAMN03003324_01076 | Not Available | Negative | 1166796 - 1167431 | 23720.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

