Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter antarcticus |
| Strain | strain ATCC 51969 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1362221 bp
Thymine Count
1361672 bp
Guanine Count
914548 bp
Cytosine Count
930759 bp
Genome Length
4570120 bp
Protein-coding Genes
4074 genes
Non-Coding Genes
88 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nicotinate-nucleotide adenylyltransferase | SAMN03003324_01057 | Not Available | Positive | 1144320 - 1144895 | 21917.4 |
| 16s rrna (cytidine1402-2'-o)-methyltransferase | SAMN03003324_01058 | Not Available | Negative | 1144897 - 1145604 | 26422.2 |
| hypothetical protein | SAMN03003324_01059 | Not Available | Positive | 1146004 - 1147407 | 54520.0 |
| bacterial peptide chain release factor 3 (brf-3) | SAMN03003324_01060 | Not Available | Positive | 1147528 - 1149111 | 59947.6 |
| aspartate aminotransferase | SAMN03003324_01061 | Not Available | Negative | 1149207 - 1150460 | 45734.0 |
| argininosuccinate lyase | SAMN03003324_01062 | Not Available | Negative | 1150485 - 1151816 | 49992.4 |
| acetylornithine deacetylase | SAMN03003324_01063 | Not Available | Negative | 1151926 - 1152996 | 38809.2 |
| pyrroline-5-carboxylate reductase | SAMN03003324_01064 | Not Available | Negative | 1152996 - 1153814 | 28451.7 |
| n-acetylglutamate kinase | SAMN03003324_01065 | Not Available | Negative | 1153821 - 1154684 | 30627.1 |
| ornithine carbamoyltransferase | SAMN03003324_01066 | Not Available | Negative | 1154636 - 1155601 | 35576.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

