Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter antarcticus |
| Strain | strain ATCC 51969 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1362221 bp
Thymine Count
1361672 bp
Guanine Count
914548 bp
Cytosine Count
930759 bp
Genome Length
4570120 bp
Protein-coding Genes
4074 genes
Non-Coding Genes
88 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN03003324_01047 | Not Available | Negative | 1135932 - 1137233 | 49709.4 |
| Trna-ser | Not Available | Not Available | Positive | 1137384 - 1137474 | Not Available |
| pyruvate kinase | SAMN03003324_01049 | Not Available | Negative | 1137520 - 1138950 | 52338.7 |
| hypothetical protein | SAMN03003324_01050 | Not Available | Negative | 1139091 - 1139510 | 16272.6 |
| acyl carrier protein | SAMN03003324_01051 | Not Available | Positive | 1139618 - 1139911 | 10777.8 |
| 3-oxoacyl-[acyl-carrier-protein] synthase ii | SAMN03003324_01052 | Not Available | Positive | 1139941 - 1141194 | 44942.5 |
| ribonuclease-3 | SAMN03003324_01053 | Not Available | Positive | 1141220 - 1141948 | 27803.8 |
| hypothetical protein | SAMN03003324_01054 | Not Available | Negative | 1141950 - 1142663 | 27323.9 |
| tigr00255 family protein | SAMN03003324_01055 | Not Available | Positive | 1142817 - 1143680 | 32713.2 |
| guanylate kinase | SAMN03003324_01056 | Not Available | Positive | 1143742 - 1144314 | 21761.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

