Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter antarcticus |
| Strain | strain ATCC 51969 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1362221 bp
Thymine Count
1361672 bp
Guanine Count
914548 bp
Cytosine Count
930759 bp
Genome Length
4570120 bp
Protein-coding Genes
4074 genes
Non-Coding Genes
88 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| beta-glucosidase | SAMN03003324_01037 | Not Available | Negative | 1123984 - 1126329 | 84990.0 |
| hypothetical protein | SAMN03003324_01038 | Not Available | Negative | 1126457 - 1127647 | 44427.2 |
| hypothetical protein | SAMN03003324_01039 | Not Available | Positive | 1127888 - 1128439 | 20755.0 |
| putative acetyltransferase | SAMN03003324_01040 | Not Available | Negative | 1128419 - 1128886 | 18119.9 |
| transcriptional regulator, deor family | SAMN03003324_01041 | Not Available | Negative | 1128907 - 1129656 | 27572.2 |
| fucose permease | SAMN03003324_01042 | Not Available | Negative | 1129688 - 1130857 | 41441.1 |
| hyaluronan synthase | SAMN03003324_01043 | Not Available | Negative | 1131048 - 1132511 | 55418.4 |
| hypothetical protein | SAMN03003324_01044 | Not Available | Negative | 1132720 - 1133139 | 15118.2 |
| signal transduction histidine kinase | SAMN03003324_01045 | Not Available | Positive | 1133305 - 1135293 | 75163.3 |
| two component transcriptional regulator, luxr family | SAMN03003324_01046 | Not Available | Positive | 1135274 - 1135912 | 23407.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

