Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter antarcticus |
| Strain | strain ATCC 51969 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1362221 bp
Thymine Count
1361672 bp
Guanine Count
914548 bp
Cytosine Count
930759 bp
Genome Length
4570120 bp
Protein-coding Genes
4074 genes
Non-Coding Genes
88 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phosphatidylglycerol:prolipoprotein diacylglycerol transferase | SAMN03003324_01007 | Not Available | Negative | 1088589 - 1089740 | 42810.2 |
| threonylcarbamoyladenosine trna methylthiotransferase mtab | SAMN03003324_01008 | Not Available | Negative | 1089761 - 1091083 | 49484.3 |
| 4-hydroxy-3-polyprenylbenzoate decarboxylase | SAMN03003324_01009 | Not Available | Negative | 1091204 - 1091773 | 20992.3 |
| Trna-his | Not Available | Not Available | Positive | 1092210 - 1092286 | Not Available |
| beta-xylosidase | SAMN03003324_01011 | Not Available | Positive | 1092457 - 1093977 | 56691.9 |
| Trna-his | Not Available | Not Available | Positive | 1094099 - 1094174 | Not Available |
| helix-turn-helix domain-containing protein | SAMN03003324_01013 | Not Available | Negative | 1094308 - 1095204 | 34553.0 |
| predicted oxidoreductase | SAMN03003324_01014 | Not Available | Positive | 1095409 - 1096392 | 36226.3 |
| snoal-like domain-containing protein | SAMN03003324_01015 | Not Available | Positive | 1096553 - 1097071 | 19673.6 |
| sigma-70 region 2 | SAMN03003324_01016 | Not Available | Positive | 1097157 - 1097597 | 16705.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

