Flavobacterium phragmitis strain CGMCC 1.10370

Rod

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Flavobacteriia

Order

Flavobacteriales

Family

Flavobacteriaceae

Genus

Flavobacterium

Description

Flavobacterium phragmitis strain CGMCC 1.10370 is characterized as a rod-shaped bacterium that possesses flagella, indicating motility. The strain has a single replicon, which suggests a streamlined genomic organization that may contribute to its adaptability within specific environments. The genomic information for this strain is cataloged under the accession number FOMH00000000.1. The presence of flagella in Flavobacterium phragmitis strain CGMCC 1.10370 allows for movement in its aquatic habitat, which may facilitate its role in the ecosystem. This motility can enhance its ability to colonize surfaces or interact with other microorganisms in its environment, potentially contributing to nutrient cycling and organic matter decomposition. Flavobacterium species are known for their role in the degradation of complex organic materials, particularly in aquatic ecosystems. The ecological insight regarding CGMCC 1.10370 is its potential contribution to the breakdown of plant-derived compounds, given its association with Phragmites, a common wetland plant. This strain may play a significant role in the microbial community dynamics within such habitats, influencing nutrient availability and supporting overall ecosystem health.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassFlavobacteriia
OrderFlavobacteriales
FamilyFlavobacteriaceae
GenusFlavobacterium
SpeciesFlavobacterium phragmitis
Strainstrain CGMCC 1.10370

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Flavobacterium phragmitis strain CGMCC 1.10370
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Flavobacterium phragmitis strain CGMCC 1.10370 genome assembly,

Gene Summary

Adenine Count

2006973 bp

Thymine Count

1972101 bp

Guanine Count

1031158 bp

Cytosine Count

1024969 bp

Genome Length

6041292 bp

Protein-coding Genes

5001 genes

Non-Coding Genes

65 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinSAMN05216297_102350Not AvailablePositive1060577 - 106097815438.3
signal transduction histidine kinaseSAMN05216297_102351Not AvailableNegative1061022 - 106207139776.9
23s rrna m(5)u-1939 methyltransferaseSAMN05216297_102352Not AvailablePositive1062233 - 106364553851.6
hypothetical proteinSAMN05216297_102353Not AvailablePositive1063655 - 106417919678.1
hypothetical proteinSAMN05216297_102354Not AvailablePositive1064199 - 106493927977.2
aspartate racemaseSAMN05216297_102355Not AvailableNegative1065096 - 106578825729.3
hypothetical proteinSAMN05216297_102356Not AvailableNegative1065809 - 10660458790.22
putative n6-adenine-specific dna methylaseSAMN05216297_102357Not AvailableNegative1066249 - 106741244487.1
methyltransferase domain-containing proteinSAMN05216297_102358Not AvailablePositive1067561 - 106832529887.1
hypothetical proteinSAMN05216297_102359Not AvailablePositive1068389 - 106905724736.2

Displaying genes 931 – 940 of 5066 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.