Flavobacterium phragmitis strain CGMCC 1.10370

Rod

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Flavobacteriia

Order

Flavobacteriales

Family

Flavobacteriaceae

Genus

Flavobacterium

Description

Flavobacterium phragmitis strain CGMCC 1.10370 is characterized as a rod-shaped bacterium that possesses flagella, indicating motility. The strain has a single replicon, which suggests a streamlined genomic organization that may contribute to its adaptability within specific environments. The genomic information for this strain is cataloged under the accession number FOMH00000000.1. The presence of flagella in Flavobacterium phragmitis strain CGMCC 1.10370 allows for movement in its aquatic habitat, which may facilitate its role in the ecosystem. This motility can enhance its ability to colonize surfaces or interact with other microorganisms in its environment, potentially contributing to nutrient cycling and organic matter decomposition. Flavobacterium species are known for their role in the degradation of complex organic materials, particularly in aquatic ecosystems. The ecological insight regarding CGMCC 1.10370 is its potential contribution to the breakdown of plant-derived compounds, given its association with Phragmites, a common wetland plant. This strain may play a significant role in the microbial community dynamics within such habitats, influencing nutrient availability and supporting overall ecosystem health.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassFlavobacteriia
OrderFlavobacteriales
FamilyFlavobacteriaceae
GenusFlavobacterium
SpeciesFlavobacterium phragmitis
Strainstrain CGMCC 1.10370

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Flavobacterium phragmitis strain CGMCC 1.10370
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Flavobacterium phragmitis strain CGMCC 1.10370 genome assembly,

Gene Summary

Adenine Count

2006973 bp

Thymine Count

1972101 bp

Guanine Count

1031158 bp

Cytosine Count

1024969 bp

Genome Length

6041292 bp

Protein-coding Genes

5001 genes

Non-Coding Genes

65 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinSAMN05216297_10167Not AvailablePositive71409 - 7175613617.3
peptidase family m28SAMN05216297_10168Not AvailablePositive71773 - 7416989285.5
nucleoside-diphosphate-sugar epimeraseSAMN05216297_10169Not AvailablePositive74280 - 7514932499.2
methylated-dna-[protein]-cysteine s-methyltransferaseSAMN05216297_10170Not AvailablePositive75286 - 7576217351.8
hypothetical proteinSAMN05216297_10171Not AvailablePositive75968 - 7668127858.6
winged helix dna-binding domain-containing proteinSAMN05216297_10172Not AvailablePositive76771 - 7784440988.1
spore maturation protein spmaSAMN05216297_10173Not AvailablePositive77955 - 7939452007.2
rep element-mobilizing transposase raytSAMN05216297_10174Not AvailablePositive80852 - 8131317946.5
hypothetical proteinSAMN05216297_10175Not AvailablePositive81318 - 8206428003.9
fumarase, class i, homodimericSAMN05216297_10176Not AvailablePositive82137 - 8374158937.4

Displaying genes 71 – 80 of 5066 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.