Flavobacterium phragmitis strain CGMCC 1.10370

Rod

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Flavobacteriia

Order

Flavobacteriales

Family

Flavobacteriaceae

Genus

Flavobacterium

Description

Flavobacterium phragmitis strain CGMCC 1.10370 is characterized as a rod-shaped bacterium that possesses flagella, indicating motility. The strain has a single replicon, which suggests a streamlined genomic organization that may contribute to its adaptability within specific environments. The genomic information for this strain is cataloged under the accession number FOMH00000000.1. The presence of flagella in Flavobacterium phragmitis strain CGMCC 1.10370 allows for movement in its aquatic habitat, which may facilitate its role in the ecosystem. This motility can enhance its ability to colonize surfaces or interact with other microorganisms in its environment, potentially contributing to nutrient cycling and organic matter decomposition. Flavobacterium species are known for their role in the degradation of complex organic materials, particularly in aquatic ecosystems. The ecological insight regarding CGMCC 1.10370 is its potential contribution to the breakdown of plant-derived compounds, given its association with Phragmites, a common wetland plant. This strain may play a significant role in the microbial community dynamics within such habitats, influencing nutrient availability and supporting overall ecosystem health.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassFlavobacteriia
OrderFlavobacteriales
FamilyFlavobacteriaceae
GenusFlavobacterium
SpeciesFlavobacterium phragmitis
Strainstrain CGMCC 1.10370

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Flavobacterium phragmitis strain CGMCC 1.10370
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Flavobacterium phragmitis strain CGMCC 1.10370 genome assembly,

Gene Summary

Adenine Count

2006973 bp

Thymine Count

1972101 bp

Guanine Count

1031158 bp

Cytosine Count

1024969 bp

Genome Length

6041292 bp

Protein-coding Genes

5001 genes

Non-Coding Genes

65 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
membrane fusion protein, multidrug efflux systemSAMN05216297_101107Not AvailablePositive108884 - 11003842376.2
hydrophobic/amphiphilic exporter-1, hae1 familySAMN05216297_101108Not AvailablePositive110042 - 113188114501.0
outer membrane protein, multidrug efflux systemSAMN05216297_101109Not AvailablePositive113185 - 11454951465.6
putative bacilliredoxin, yphp/yqiw familySAMN05216297_101110Not AvailableNegative114972 - 11538214732.7
dna-binding transcriptional regulator, arsr familySAMN05216297_101111Not AvailableNegative115549 - 11595915791.4
lycopene beta-cyclaseSAMN05216297_101112Not AvailableNegative116149 - 11733946878.4
hypothetical proteinSAMN05216297_101113Not AvailablePositive117479 - 11830933735.4
glycosyltransferase involved in cell wall bisynthesisSAMN05216297_101114Not AvailablePositive118339 - 11941841519.1
glycosyltransferase involved in cell wall bisynthesisSAMN05216297_101115Not AvailablePositive119451 - 12058743424.4
glycosyl transferases group 1SAMN05216297_101116Not AvailableNegative120582 - 12177846492.1

Displaying genes 111 – 120 of 5066 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.