Flavobacterium phragmitis strain CGMCC 1.10370

Rod

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Flavobacteriia

Order

Flavobacteriales

Family

Flavobacteriaceae

Genus

Flavobacterium

Description

Flavobacterium phragmitis strain CGMCC 1.10370 is characterized as a rod-shaped bacterium that possesses flagella, indicating motility. The strain has a single replicon, which suggests a streamlined genomic organization that may contribute to its adaptability within specific environments. The genomic information for this strain is cataloged under the accession number FOMH00000000.1. The presence of flagella in Flavobacterium phragmitis strain CGMCC 1.10370 allows for movement in its aquatic habitat, which may facilitate its role in the ecosystem. This motility can enhance its ability to colonize surfaces or interact with other microorganisms in its environment, potentially contributing to nutrient cycling and organic matter decomposition. Flavobacterium species are known for their role in the degradation of complex organic materials, particularly in aquatic ecosystems. The ecological insight regarding CGMCC 1.10370 is its potential contribution to the breakdown of plant-derived compounds, given its association with Phragmites, a common wetland plant. This strain may play a significant role in the microbial community dynamics within such habitats, influencing nutrient availability and supporting overall ecosystem health.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassFlavobacteriia
OrderFlavobacteriales
FamilyFlavobacteriaceae
GenusFlavobacterium
SpeciesFlavobacterium phragmitis
Strainstrain CGMCC 1.10370

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Flavobacterium phragmitis strain CGMCC 1.10370
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Flavobacterium phragmitis strain CGMCC 1.10370 genome assembly,

Gene Summary

Adenine Count

2006973 bp

Thymine Count

1972101 bp

Guanine Count

1031158 bp

Cytosine Count

1024969 bp

Genome Length

6041292 bp

Protein-coding Genes

5001 genes

Non-Coding Genes

65 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinSAMN05216297_102422Not AvailableNegative1130257 - 11304426995.56
rna polymerase, sigma subunit, ecf familySAMN05216297_102423Not AvailableNegative1130450 - 113103422628.7
excinuclease abc subunit aSAMN05216297_102424Not AvailablePositive1131577 - 1134372104517.0
hypothetical proteinSAMN05216297_102425Not AvailableNegative1134457 - 113475611390.8
mechanosensitive ion channelSAMN05216297_102426Not AvailableNegative1134986 - 113663562362.6
membrane protein involved in the export of o-antigen and teichoic acidSAMN05216297_102427Not AvailableNegative1136730 - 113819956013.6
glycosyltransferase family 4SAMN05216297_102428Not AvailableNegative1138239 - 113952549039.4
nucleotidyl transferase of unknown functionSAMN05216297_102429Not AvailableNegative1139549 - 114001017736.2
membrane protein yfhoSAMN05216297_102430Not AvailableNegative1140220 - 114264690881.6
protein of unknown functionSAMN05216297_102431Not AvailableNegative1142696 - 114299211587.6

Displaying genes 1001 – 1010 of 5066 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.