Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter suwonensis |
| Strain | strain DSM 18130 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1755941 bp
Thymine Count
1751697 bp
Guanine Count
1139050 bp
Cytosine Count
1154468 bp
Genome Length
5803831 bp
Protein-coding Genes
4873 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acetyltransferase (isoleucine patch superfamily) | SAMN04488511_10349 | Not Available | Positive | 1133838 - 1134458 | 22350.4 |
| gliding motility-associated c-terminal domain-containing protein | SAMN04488511_10350 | Not Available | Positive | 1134626 - 1138237 | 126834.0 |
| type ix secretion system membrane protein, porp/sprf family | SAMN04488511_10351 | Not Available | Positive | 1138266 - 1139159 | 32612.7 |
| wd40-like beta propeller repeat | SAMN04488511_10352 | Not Available | Positive | 1139163 - 1141301 | 80363.8 |
| sugar transferase involved in lps biosynthesis (colanic, teichoic acid) | SAMN04488511_10353 | Not Available | Negative | 1141407 - 1142489 | 40974.3 |
| response regulator receiver domain-containing protein | SAMN04488511_10354 | Not Available | Negative | 1142476 - 1142859 | 14183.7 |
| udp-n-acetyl-d-galactosamine dehydrogenase | SAMN04488511_10355 | Not Available | Negative | 1143133 - 1144410 | 47033.9 |
| glucose-1-phosphate thymidylyltransferase | SAMN04488511_10356 | Not Available | Negative | 1144649 - 1145509 | 31315.0 |
| dtdp-4-dehydrorhamnose reductase | SAMN04488511_10357 | Not Available | Negative | 1145578 - 1146435 | 31155.0 |
| dtdp-4-dehydrorhamnose 3,5-epimerase | SAMN04488511_10358 | Not Available | Negative | 1146432 - 1146980 | 20585.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
