Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter suwonensis |
| Strain | strain DSM 18130 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1755941 bp
Thymine Count
1751697 bp
Guanine Count
1139050 bp
Cytosine Count
1154468 bp
Genome Length
5803831 bp
Protein-coding Genes
4873 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| membrane protein involved in the export of o-antigen and teichoic acid | SAMN04488511_10339 | Not Available | Positive | 1122101 - 1123438 | 49926.2 |
| glycosyl transferase family 11 | SAMN04488511_10340 | Not Available | Positive | 1123435 - 1124253 | 32058.4 |
| glycosyltransferase involved in cell wall bisynthesis | SAMN04488511_10341 | Not Available | Positive | 1124269 - 1125480 | 45745.4 |
| hypothetical protein | SAMN04488511_10342 | Not Available | Negative | 1125500 - 1125757 | 9502.88 |
| glycosyltransferase involved in cell wall bisynthesis | SAMN04488511_10343 | Not Available | Negative | 1125775 - 1126995 | 46658.4 |
| peptidoglycan/lps o-acetylase oafa/yrhl, contains acyltransferase and sgnh-hydrolase domains | SAMN04488511_10344 | Not Available | Negative | 1127017 - 1128186 | 45996.3 |
| o-antigen ligase like membrane protein | SAMN04488511_10345 | Not Available | Negative | 1128276 - 1129715 | 53450.7 |
| glycosyltransferase, catalytic subunit of cellulose synthase and poly-beta-1,6-n-acetylglucosamine synthase | SAMN04488511_10346 | Not Available | Negative | 1129712 - 1130896 | 44618.8 |
| chromosome partitioning atpase, mrp family, contains fe-s cluster | SAMN04488511_10347 | Not Available | Negative | 1130896 - 1133052 | 81113.4 |
| outer membrane efflux protein | SAMN04488511_10348 | Not Available | Negative | 1133052 - 1133753 | 26151.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
