Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter suwonensis |
| Strain | strain DSM 18130 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1755941 bp
Thymine Count
1751697 bp
Guanine Count
1139050 bp
Cytosine Count
1154468 bp
Genome Length
5803831 bp
Protein-coding Genes
4873 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| two component transcriptional regulator, lyttr family | SAMN04488511_102351 | Not Available | Positive | 1069817 - 1070548 | 28043.1 |
| hypothetical protein | SAMN04488511_102352 | Not Available | Positive | 1071018 - 1071569 | 19862.1 |
| hypothetical protein | SAMN04488511_102353 | Not Available | Positive | 1071566 - 1072648 | 39370.0 |
| phage integrase sam-like domain-containing protein | SAMN04488511_102354 | Not Available | Negative | 1072993 - 1074258 | 48917.6 |
| Trna-met | Not Available | Not Available | Positive | 1074494 - 1074567 | Not Available |
| uvrd-like helicase c-terminal domain-containing protein | SAMN04488511_102356 | Not Available | Positive | 1074794 - 1076887 | 78767.1 |
| hypothetical chaperone protein | SAMN04488511_102357 | Not Available | Positive | 1076964 - 1078232 | 47570.6 |
| arac-type dna-binding protein | SAMN04488511_102358 | Not Available | Negative | 1078729 - 1079511 | 30129.7 |
| 'cold-shock' dna-binding domain-containing protein | SAMN04488511_102359 | Not Available | Negative | 1079774 - 1079971 | 7082.55 |
| cold-shock dna-binding protein family | SAMN04488511_102360 | Not Available | Negative | 1079979 - 1080164 | 6844.17 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
