Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter suwonensis |
| Strain | strain DSM 18130 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1755941 bp
Thymine Count
1751697 bp
Guanine Count
1139050 bp
Cytosine Count
1154468 bp
Genome Length
5803831 bp
Protein-coding Genes
4873 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycerophosphoryl diester phosphodiesterase | SAMN04488511_10170 | Not Available | Negative | 73889 - 74788 | 33662.0 |
| calcineurin-like phosphoesterase | SAMN04488511_10171 | Not Available | Negative | 74973 - 76382 | 52951.8 |
| hypothetical protein | SAMN04488511_10172 | Not Available | Negative | 76449 - 78089 | 57925.6 |
| starch-binding associating with outer membrane | SAMN04488511_10173 | Not Available | Negative | 78112 - 79677 | 57773.2 |
| tonb-linked outer membrane protein, susc/raga family | SAMN04488511_10174 | Not Available | Negative | 79689 - 83252 | 131225.0 |
| fecr family protein | SAMN04488511_10175 | Not Available | Negative | 83310 - 84308 | 38062.8 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN04488511_10176 | Not Available | Negative | 84732 - 85298 | 22251.1 |
| sterol desaturase/sphingolipid hydroxylase, fatty acid hydroxylase superfamily | SAMN04488511_10177 | Not Available | Negative | 85363 - 86592 | 48345.2 |
| polyphosphate glucokinase | SAMN04488511_10178 | Not Available | Positive | 86748 - 87506 | 28110.8 |
| 6-phosphogluconate dehydrogenase | SAMN04488511_10179 | Not Available | Positive | 87593 - 89008 | 52225.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
