Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter suwonensis |
| Strain | strain DSM 18130 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1755941 bp
Thymine Count
1751697 bp
Guanine Count
1139050 bp
Cytosine Count
1154468 bp
Genome Length
5803831 bp
Protein-coding Genes
4873 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tonb-linked outer membrane protein, susc/raga family | SAMN04488511_102261 | Not Available | Negative | 952051 - 955236 | 115868.0 |
| mfs transporter, sugar porter (sp) family | SAMN04488511_102262 | Not Available | Negative | 955271 - 956689 | 51280.9 |
| mannose-6-phosphate isomerase, class i | SAMN04488511_102263 | Not Available | Negative | 956696 - 958522 | 69715.9 |
| transcriptional regulator, gntr family | SAMN04488511_102264 | Not Available | Positive | 958889 - 959623 | 28085.0 |
| uvrd/rep helicase n-terminal domain-containing protein | SAMN04488511_102265 | Not Available | Positive | 959850 - 961613 | 66811.5 |
| hypothetical protein | SAMN04488511_102266 | Not Available | Positive | 961867 - 962748 | 34124.9 |
| helix-turn-helix domain-containing protein | SAMN04488511_102267 | Not Available | Negative | 963023 - 963298 | 10722.2 |
| Trna-pro | Not Available | Not Available | Positive | 964834 - 964910 | Not Available |
| hypothetical protein | SAMN04488511_102269 | Not Available | Negative | 965059 - 966588 | 58029.5 |
| phosphatidylinositol glycan, class b | SAMN04488511_102270 | Not Available | Negative | 966782 - 968290 | 58348.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
