Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter suwonensis |
| Strain | strain DSM 18130 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1755941 bp
Thymine Count
1751697 bp
Guanine Count
1139050 bp
Cytosine Count
1154468 bp
Genome Length
5803831 bp
Protein-coding Genes
4873 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| relaxase/mobilisation nuclease domain-containing protein | SAMN04488511_102251 | Not Available | Negative | 937629 - 938795 | 43727.7 |
| mobilisation protein (mobc) | SAMN04488511_102252 | Not Available | Negative | 939041 - 939445 | 15544.4 |
| hypothetical protein | SAMN04488511_102253 | Not Available | Negative | 939646 - 939933 | 11132.7 |
| hypothetical protein | SAMN04488511_102254 | Not Available | Negative | 940150 - 940431 | 10343.6 |
| alpha-glucosidase | SAMN04488511_102255 | Not Available | Negative | 941192 - 943063 | 69727.5 |
| alpha-glucosidase | SAMN04488511_102256 | Not Available | Negative | 943186 - 945135 | 73371.3 |
| alpha-1,2-mannosidase, putative | SAMN04488511_102257 | Not Available | Negative | 945636 - 947990 | 86918.8 |
| glycosyl hydrolase family 76 | SAMN04488511_102258 | Not Available | Negative | 948010 - 949215 | 44987.1 |
| suse outer membrane protein | SAMN04488511_102259 | Not Available | Negative | 949264 - 950391 | 40275.4 |
| starch-binding associating with outer membrane | SAMN04488511_102260 | Not Available | Negative | 950405 - 952027 | 59998.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
