Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter suwonensis |
| Strain | strain DSM 18130 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1755941 bp
Thymine Count
1751697 bp
Guanine Count
1139050 bp
Cytosine Count
1154468 bp
Genome Length
5803831 bp
Protein-coding Genes
4873 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cytochrome c oxidase, cbb3-type, subunit iii | SAMN04488511_10159 | Not Available | Positive | 61667 - 62089 | 15600.8 |
| hypothetical protein | SAMN04488511_10160 | Not Available | Positive | 62749 - 62970 | 8298.31 |
| polyphosphate:nucleotide phosphotransferase, ppk2 family | SAMN04488511_10162 | Not Available | Negative | 63208 - 64086 | 33800.3 |
| penicillin-binding protein 1a | SAMN04488511_10163 | Not Available | Positive | 64229 - 66685 | 93666.7 |
| component of the tol biopolymer transport system | SAMN04488511_10164 | Not Available | Positive | 66860 - 70033 | 119001.0 |
| putative endonuclease | SAMN04488511_10165 | Not Available | Negative | 70212 - 70562 | 13834.8 |
| dna-binding transcriptional regulator, xre-family hth domain | SAMN04488511_10166 | Not Available | Positive | 70696 - 71472 | 29431.2 |
| hypothetical protein | SAMN04488511_10167 | Not Available | Positive | 71552 - 72004 | 16838.6 |
| 8-amino-7-oxononanoate synthase | SAMN04488511_10168 | Not Available | Positive | 72078 - 73199 | 41354.5 |
| dethiobiotin synthetase | SAMN04488511_10169 | Not Available | Positive | 73200 - 73808 | 22445.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
