Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter suwonensis |
| Strain | strain DSM 18130 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1755941 bp
Thymine Count
1751697 bp
Guanine Count
1139050 bp
Cytosine Count
1154468 bp
Genome Length
5803831 bp
Protein-coding Genes
4873 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tonb-linked outer membrane protein, susc/raga family | SAMN04488511_102201 | Not Available | Positive | 872702 - 876154 | 127088.0 |
| starch-binding associating with outer membrane | SAMN04488511_102202 | Not Available | Positive | 876166 - 877638 | 55221.6 |
| predicted phosphohydrolase, mpp superfamily | SAMN04488511_102203 | Not Available | Positive | 877669 - 878955 | 48623.2 |
| glycerophosphoryl diester phosphodiesterase | SAMN04488511_102204 | Not Available | Positive | 878958 - 879785 | 30845.6 |
| pas domain s-box-containing protein | SAMN04488511_102205 | Not Available | Negative | 879854 - 882328 | 94347.0 |
| hypothetical protein | SAMN04488511_102206 | Not Available | Positive | 882768 - 883058 | 10403.6 |
| uncharacterized membrane protein ycap, duf421 family | SAMN04488511_102207 | Not Available | Positive | 883531 - 884223 | 25872.8 |
| hypothetical protein | SAMN04488511_102208 | Not Available | Negative | 884268 - 884597 | 12690.4 |
| beta-glucosidase | SAMN04488511_102209 | Not Available | Negative | 885010 - 887208 | 80998.8 |
| alpha-d-xyloside xylohydrolase | SAMN04488511_102210 | Not Available | Negative | 887237 - 890053 | 107837.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
