Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter suwonensis |
| Strain | strain DSM 18130 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1755941 bp
Thymine Count
1751697 bp
Guanine Count
1139050 bp
Cytosine Count
1154468 bp
Genome Length
5803831 bp
Protein-coding Genes
4873 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| thiol-disulfide isomerase or thioredoxin | SAMN04488511_102181 | Not Available | Negative | 846021 - 848003 | 74679.8 |
| susd family protein | SAMN04488511_102182 | Not Available | Negative | 848346 - 849743 | 52199.7 |
| tonb-linked outer membrane protein, susc/raga family | SAMN04488511_102183 | Not Available | Negative | 849757 - 853347 | 131129.0 |
| fecr family protein | SAMN04488511_102184 | Not Available | Negative | 853390 - 854409 | 38599.5 |
| rna polymerase sigma factor, sigma-70 family | SAMN04488511_102185 | Not Available | Negative | 854560 - 855171 | 24109.1 |
| hypothetical protein | SAMN04488511_102186 | Not Available | Negative | 855538 - 855969 | 15786.8 |
| alpha-galactosidase | SAMN04488511_102187 | Not Available | Negative | 856175 - 858187 | 73969.2 |
| predicted purr-regulated permease perm | SAMN04488511_102188 | Not Available | Positive | 858550 - 859629 | 39674.1 |
| dipeptidyl peptidase iv (dpp iv) n-terminal region | SAMN04488511_102189 | Not Available | Negative | 859822 - 862170 | 87246.0 |
| hypothetical protein | SAMN04488511_102190 | Not Available | Negative | 862369 - 863139 | 28856.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
